Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum3Q8BKS9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum3Q8BKS9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pum3Q8BKS9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 Sybu-209ENSMUST00000228639 4113 ntBASIC16.16■□□□□ 0.18
Pum3Q8BKS9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pum3Q8BKS9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Gm27300-201ENSMUST00000184085 97 ntBASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Gm27335-201ENSMUST00000184758 97 ntBASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pum3Q8BKS9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Asic1-205ENSMUST00000228185 1818 ntBASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pum3Q8BKS9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.13■□□□□ 0.17
Pum3Q8BKS9 AW822252-206ENSMUST00000208904 237 ntBASIC16.13■□□□□ 0.17
Pum3Q8BKS9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms