Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Gm27867-201ENSMUST00000184778 125 ntBASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Gm18669-201ENSMUST00000216049 778 ntBASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Ccdc40Q8BI79 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc40Q8BI79 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc40Q8BI79 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Gm7367-201ENSMUST00000057611 492 ntBASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc40Q8BI79 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Ccdc40Q8BI79 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ccdc40Q8BI79 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ccdc40Q8BI79 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Ccdc40Q8BI79 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms