Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn3bQ8BHK2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Scn3bQ8BHK2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Scn3bQ8BHK2 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.21□□□□□ -0.14
Scn3bQ8BHK2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
Scn3bQ8BHK2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scn3bQ8BHK2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn3bQ8BHK2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Scn3bQ8BHK2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Scn3bQ8BHK2 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Scn3bQ8BHK2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms