Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Samm50Q8BGH2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Samm50Q8BGH2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Samm50Q8BGH2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Gm4459-201ENSMUST00000118750 468 ntBASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Gm12497-201ENSMUST00000138778 237 ntBASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.89■□□□□ 0.45
Samm50Q8BGH2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Samm50Q8BGH2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm6257-201ENSMUST00000163864 910 ntBASIC17.88■□□□□ 0.45
Samm50Q8BGH2 Gm44357-201ENSMUST00000195897 142 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms