Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atg4bQ8BGE6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Mir5131-201ENSMUST00000175426 93 ntBASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 AV026068-213ENSMUST00000223675 1171 ntBASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Atg4bQ8BGE6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Atg4bQ8BGE6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Atg4bQ8BGE6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Gm11764-201ENSMUST00000120221 623 ntBASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Gm9682-201ENSMUST00000197505 556 ntBASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Atg4bQ8BGE6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Mzt1-203ENSMUST00000227948 952 ntBASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Atg4bQ8BGE6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms