Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vrk1Q80X41 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Vrk1Q80X41 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Gm13616-201ENSMUST00000120600 222 ntBASIC14.57□□□□□ -0.08
Vrk1Q80X41 Gm11745-201ENSMUST00000121669 448 ntBASIC14.57□□□□□ -0.08
Vrk1Q80X41 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.57□□□□□ -0.08
Vrk1Q80X41 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Vrk1Q80X41 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.57□□□□□ -0.08
Vrk1Q80X41 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Vrk1Q80X41 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.56□□□□□ -0.08
Vrk1Q80X41 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Gm12008-201ENSMUST00000117791 755 ntBASIC14.56□□□□□ -0.08
Vrk1Q80X41 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Gm8318-201ENSMUST00000182954 872 ntBASIC14.56□□□□□ -0.08
Vrk1Q80X41 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vrk1Q80X41 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vrk1Q80X41 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.55□□□□□ -0.08
Vrk1Q80X41 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Rprl2-201ENSMUST00000157150 290 ntBASIC14.55□□□□□ -0.08
Vrk1Q80X41 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.55□□□□□ -0.08
Vrk1Q80X41 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vrk1Q80X41 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms