Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim36Q80WG7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Trim36Q80WG7 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.77□□□□□ -0.05
Trim36Q80WG7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Gm13312-201ENSMUST00000119631 718 ntBASIC14.77□□□□□ -0.05
Trim36Q80WG7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim36Q80WG7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trim36Q80WG7 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Gm13884-201ENSMUST00000118103 829 ntBASIC14.76□□□□□ -0.05
Trim36Q80WG7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.76□□□□□ -0.05
Trim36Q80WG7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim36Q80WG7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim36Q80WG7 BC037039-201ENSMUST00000192003 2205 ntBASIC14.76□□□□□ -0.05
Trim36Q80WG7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim36Q80WG7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Mir8098-201ENSMUST00000184011 137 ntBASIC14.75□□□□□ -0.05
Trim36Q80WG7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trim36Q80WG7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim36Q80WG7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim36Q80WG7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim36Q80WG7 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.74□□□□□ -0.05
Trim36Q80WG7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim36Q80WG7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim36Q80WG7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim36Q80WG7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim36Q80WG7 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.74□□□□□ -0.05
Trim36Q80WG7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trim36Q80WG7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim36Q80WG7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim36Q80WG7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim36Q80WG7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.74□□□□□ -0.05
Trim36Q80WG7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms