Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Gm12428-201ENSMUST00000119844 727 ntBASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Gm27437-201ENSMUST00000183429 107 ntBASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38bQ80SY5 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Prpf38bQ80SY5 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Prpf38bQ80SY5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Prpf38bQ80SY5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Prpf38bQ80SY5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Prpf38bQ80SY5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Gm14127-201ENSMUST00000117906 678 ntBASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.95■□□□□ 0.14
Prpf38bQ80SY5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38bQ80SY5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms