Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Gm13616-201ENSMUST00000120600 222 ntBASIC14.09□□□□□ -0.15
Pif1Q80SX8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Gm5312-201ENSMUST00000203728 547 ntBASIC14.09□□□□□ -0.15
Pif1Q80SX8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pif1Q80SX8 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.09□□□□□ -0.15
Pif1Q80SX8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pif1Q80SX8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pif1Q80SX8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pif1Q80SX8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pif1Q80SX8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.08□□□□□ -0.16
Pif1Q80SX8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pif1Q80SX8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.08□□□□□ -0.16
Pif1Q80SX8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.08□□□□□ -0.16
Pif1Q80SX8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.07□□□□□ -0.16
Pif1Q80SX8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.07□□□□□ -0.16
Pif1Q80SX8 Thap2-203ENSMUST00000218989 527 ntBASIC14.07□□□□□ -0.16
Pif1Q80SX8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Pif1Q80SX8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.07□□□□□ -0.16
Pif1Q80SX8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.07□□□□□ -0.16
Pif1Q80SX8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pif1Q80SX8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pif1Q80SX8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pif1Q80SX8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pif1Q80SX8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pif1Q80SX8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pif1Q80SX8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pif1Q80SX8 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.06□□□□□ -0.16
Pif1Q80SX8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pif1Q80SX8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms