Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Gm15794-201ENSMUST00000120182 631 ntBASIC12.46□□□□□ -0.41
Vma21Q78T54 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.46□□□□□ -0.41
Vma21Q78T54 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.46□□□□□ -0.41
Vma21Q78T54 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vma21Q78T54 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Vma21Q78T54 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vma21Q78T54 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vma21Q78T54 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vma21Q78T54 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vma21Q78T54 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vma21Q78T54 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vma21Q78T54 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.46□□□□□ -0.42
Vma21Q78T54 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vma21Q78T54 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vma21Q78T54 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Vma21Q78T54 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.45□□□□□ -0.42
Vma21Q78T54 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Vma21Q78T54 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.45□□□□□ -0.42
Vma21Q78T54 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.45□□□□□ -0.42
Vma21Q78T54 Gm44454-201ENSMUST00000198541 138 ntBASIC12.45□□□□□ -0.42
Vma21Q78T54 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.45□□□□□ -0.42
Vma21Q78T54 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Vma21Q78T54 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Vma21Q78T54 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21Q78T54 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vma21Q78T54 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Vma21Q78T54 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Vma21Q78T54 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vma21Q78T54 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21Q78T54 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21Q78T54 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21Q78T54 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21Q78T54 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vma21Q78T54 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21Q78T54 AA414768-201ENSMUST00000121924 1257 ntBASIC12.44□□□□□ -0.42
Vma21Q78T54 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.44□□□□□ -0.42
Vma21Q78T54 Gm23634-201ENSMUST00000175071 91 ntBASIC12.44□□□□□ -0.42
Vma21Q78T54 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21Q78T54 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.44□□□□□ -0.42
Vma21Q78T54 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.44□□□□□ -0.42
Vma21Q78T54 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21Q78T54 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21Q78T54 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Vma21Q78T54 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21Q78T54 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21Q78T54 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.44□□□□□ -0.42
Vma21Q78T54 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Vma21Q78T54 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vma21Q78T54 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21Q78T54 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21Q78T54 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21Q78T54 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Vma21Q78T54 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Vma21Q78T54 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Vma21Q78T54 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vma21Q78T54 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21Q78T54 Gm14722-201ENSMUST00000118943 689 ntBASIC12.43□□□□□ -0.42
Vma21Q78T54 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.43□□□□□ -0.42
Vma21Q78T54 Mir3081-201ENSMUST00000175305 84 ntBASIC12.43□□□□□ -0.42
Vma21Q78T54 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.43□□□□□ -0.42
Vma21Q78T54 Gm19164-201ENSMUST00000210667 640 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms