Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ssx9Q6XAS3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.22■□□□□ 0.03
Ssx9Q6XAS3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Gm7977-201ENSMUST00000193787 748 ntBASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ssx9Q6XAS3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.21■□□□□ 0.02
Ssx9Q6XAS3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Ssx9Q6XAS3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Gm8318-201ENSMUST00000182954 872 ntBASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssx9Q6XAS3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssx9Q6XAS3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssx9Q6XAS3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssx9Q6XAS3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Ssx9Q6XAS3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssx9Q6XAS3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssx9Q6XAS3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms