Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nup98Q6PFD9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Gm24543-201ENSMUST00000103867 82 ntBASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Gm8410-201ENSMUST00000117225 605 ntBASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Gm18766-201ENSMUST00000189811 808 ntBASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Gm43703-201ENSMUST00000200523 763 ntBASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Gm7775-201ENSMUST00000218871 853 ntBASIC17.81■□□□□ 0.44
Nup98Q6PFD9 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup98Q6PFD9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nup98Q6PFD9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup98Q6PFD9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.8■□□□□ 0.44
Nup98Q6PFD9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Nup98Q6PFD9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup98Q6PFD9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup98Q6PFD9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup98Q6PFD9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup98Q6PFD9 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup98Q6PFD9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nup98Q6PFD9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nup98Q6PFD9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.79■□□□□ 0.44
Nup98Q6PFD9 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Gm13453-201ENSMUST00000118708 357 ntBASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Gm14719-201ENSMUST00000121891 340 ntBASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Gm45098-201ENSMUST00000207179 657 ntBASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Gm2423-201ENSMUST00000074863 733 ntBASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nup98Q6PFD9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Gm7730-201ENSMUST00000212486 454 ntBASIC17.78■□□□□ 0.44
Nup98Q6PFD9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nup98Q6PFD9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms