Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Gm11539-201ENSMUST00000119837 557 ntBASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.51□□□□□ -0.09
Rnf220Q6PDX6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rnf220Q6PDX6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Gm7370-201ENSMUST00000219471 767 ntBASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rnf220Q6PDX6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Gm13474-201ENSMUST00000122466 815 ntBASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rnf220Q6PDX6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Rubie-203ENSMUST00000227803 2430 ntBASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms