Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm15487-201ENSMUST00000122373 465 ntBASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Chd4Q6PDQ2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Gm7653-201ENSMUST00000214567 508 ntBASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Gm10313-201ENSMUST00000095320 1002 ntBASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chd4Q6PDQ2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Shd-206ENSMUST00000225145 998 ntBASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chd4Q6PDQ2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Gm7488-201ENSMUST00000117148 684 ntBASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Gm45098-201ENSMUST00000207179 657 ntBASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chd4Q6PDQ2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Gm6473-201ENSMUST00000188572 1210 ntBASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Gm5186-201ENSMUST00000218781 920 ntBASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Gm43195-201ENSMUST00000200614 2332 ntBASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.68■□□□□ 0.74
Chd4Q6PDQ2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC19.67■□□□□ 0.74
Chd4Q6PDQ2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms