Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Smarcc2Q6PDG5 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Gm8318-201ENSMUST00000182954 872 ntBASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Gm15590-201ENSMUST00000078419 552 ntBASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smarcc2Q6PDG5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Gm43514-201ENSMUST00000198852 424 ntBASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Gm18206-201ENSMUST00000207027 926 ntBASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smarcc2Q6PDG5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 AW822252-206ENSMUST00000208904 237 ntBASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smarcc2Q6PDG5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Gm1401-201ENSMUST00000122048 772 ntBASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms