Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm6222-201ENSMUST00000120787 396 ntBASIC16.34■□□□□ 0.21
ShbQ6PD21 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.34■□□□□ 0.21
ShbQ6PD21 Gm27892-201ENSMUST00000185017 106 ntBASIC16.34■□□□□ 0.21
ShbQ6PD21 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.34■□□□□ 0.21
ShbQ6PD21 Gm45331-201ENSMUST00000209868 554 ntBASIC16.34■□□□□ 0.21
ShbQ6PD21 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ShbQ6PD21 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.34■□□□□ 0.21
ShbQ6PD21 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
ShbQ6PD21 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ShbQ6PD21 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ShbQ6PD21 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.34■□□□□ 0.21
ShbQ6PD21 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ShbQ6PD21 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ShbQ6PD21 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ShbQ6PD21 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ShbQ6PD21 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
ShbQ6PD21 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ShbQ6PD21 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.33■□□□□ 0.2
ShbQ6PD21 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.33■□□□□ 0.2
ShbQ6PD21 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.33■□□□□ 0.2
ShbQ6PD21 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.33■□□□□ 0.2
ShbQ6PD21 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.33■□□□□ 0.2
ShbQ6PD21 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShbQ6PD21 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.33■□□□□ 0.2
ShbQ6PD21 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ShbQ6PD21 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ShbQ6PD21 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShbQ6PD21 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.33■□□□□ 0.2
ShbQ6PD21 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShbQ6PD21 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShbQ6PD21 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.33■□□□□ 0.2
ShbQ6PD21 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShbQ6PD21 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShbQ6PD21 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShbQ6PD21 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShbQ6PD21 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShbQ6PD21 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShbQ6PD21 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShbQ6PD21 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.33■□□□□ 0.2
ShbQ6PD21 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ShbQ6PD21 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.33■□□□□ 0.2
ShbQ6PD21 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.32■□□□□ 0.2
ShbQ6PD21 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ShbQ6PD21 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ShbQ6PD21 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
ShbQ6PD21 Gm12742-201ENSMUST00000117326 410 ntBASIC16.32■□□□□ 0.2
ShbQ6PD21 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ShbQ6PD21 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
ShbQ6PD21 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.32■□□□□ 0.2
ShbQ6PD21 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.32■□□□□ 0.2
ShbQ6PD21 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.32■□□□□ 0.2
ShbQ6PD21 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShbQ6PD21 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.32■□□□□ 0.2
ShbQ6PD21 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.32■□□□□ 0.2
ShbQ6PD21 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.32■□□□□ 0.2
ShbQ6PD21 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.32■□□□□ 0.2
ShbQ6PD21 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.32■□□□□ 0.2
ShbQ6PD21 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShbQ6PD21 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShbQ6PD21 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShbQ6PD21 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.32■□□□□ 0.2
ShbQ6PD21 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ShbQ6PD21 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ShbQ6PD21 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ShbQ6PD21 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ShbQ6PD21 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ShbQ6PD21 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShbQ6PD21 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShbQ6PD21 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ShbQ6PD21 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ShbQ6PD21 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.31■□□□□ 0.2
ShbQ6PD21 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ShbQ6PD21 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShbQ6PD21 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShbQ6PD21 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.31■□□□□ 0.2
ShbQ6PD21 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.31■□□□□ 0.2
ShbQ6PD21 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.31■□□□□ 0.2
ShbQ6PD21 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ShbQ6PD21 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.31■□□□□ 0.2
ShbQ6PD21 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ShbQ6PD21 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ShbQ6PD21 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ShbQ6PD21 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ShbQ6PD21 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShbQ6PD21 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShbQ6PD21 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ShbQ6PD21 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShbQ6PD21 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.3■□□□□ 0.2
ShbQ6PD21 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShbQ6PD21 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ShbQ6PD21 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms