Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Abcf1Q6P542 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Gm17971-201ENSMUST00000190239 806 ntBASIC17.13■□□□□ 0.33
Abcf1Q6P542 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.13■□□□□ 0.33
Abcf1Q6P542 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.13■□□□□ 0.33
Abcf1Q6P542 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Abcf1Q6P542 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.12■□□□□ 0.33
Abcf1Q6P542 Gm12895-201ENSMUST00000122214 226 ntBASIC17.12■□□□□ 0.33
Abcf1Q6P542 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.12■□□□□ 0.33
Abcf1Q6P542 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.12■□□□□ 0.33
Abcf1Q6P542 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.12■□□□□ 0.33
Abcf1Q6P542 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Abcf1Q6P542 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Abcf1Q6P542 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.11■□□□□ 0.33
Abcf1Q6P542 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcf1Q6P542 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.1■□□□□ 0.33
Abcf1Q6P542 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcf1Q6P542 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcf1Q6P542 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.1■□□□□ 0.33
Abcf1Q6P542 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms