Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Gm37722-201ENSMUST00000193757 208 ntBASIC15.71■□□□□ 0.11
Krt42Q6IFX2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.71■□□□□ 0.11
Krt42Q6IFX2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Krt42Q6IFX2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Krt42Q6IFX2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Krt42Q6IFX2 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Krt42Q6IFX2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Krt42Q6IFX2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Gm13168-201ENSMUST00000121771 632 ntBASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Gm27011-201ENSMUST00000182352 972 ntBASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Krt42Q6IFX2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Krt42Q6IFX2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.68■□□□□ 0.1
Krt42Q6IFX2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms