Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm27741-201ENSMUST00000185060 237 ntBASIC18.75■□□□□ 0.59
Trim27Q62158 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim27Q62158 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim27Q62158 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim27Q62158 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim27Q62158 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim27Q62158 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim27Q62158 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim27Q62158 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim27Q62158 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim27Q62158 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim27Q62158 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 Mir5126-201ENSMUST00000175513 77 ntBASIC18.74■□□□□ 0.59
Trim27Q62158 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim27Q62158 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim27Q62158 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim27Q62158 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim27Q62158 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.74■□□□□ 0.59
Trim27Q62158 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim27Q62158 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim27Q62158 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim27Q62158 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim27Q62158 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.73■□□□□ 0.59
Trim27Q62158 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.73■□□□□ 0.59
Trim27Q62158 Gm12350-201ENSMUST00000121208 462 ntBASIC18.73■□□□□ 0.59
Trim27Q62158 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim27Q62158 Gm27628-201ENSMUST00000184911 107 ntBASIC18.73■□□□□ 0.59
Trim27Q62158 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Gm15590-201ENSMUST00000078419 552 ntBASIC18.73■□□□□ 0.59
Trim27Q62158 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim27Q62158 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.72■□□□□ 0.59
Trim27Q62158 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.72■□□□□ 0.59
Trim27Q62158 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.72■□□□□ 0.59
Trim27Q62158 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim27Q62158 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.72■□□□□ 0.59
Trim27Q62158 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim27Q62158 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.71■□□□□ 0.59
Trim27Q62158 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim27Q62158 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.71■□□□□ 0.59
Trim27Q62158 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Trim27Q62158 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.71■□□□□ 0.59
Trim27Q62158 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim27Q62158 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim27Q62158 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trim27Q62158 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim27Q62158 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Trim27Q62158 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms