Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VcanQ62059 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.19□□□□□ -0.14
VcanQ62059 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Gm15823-201ENSMUST00000064305 670 ntBASIC14.19□□□□□ -0.14
VcanQ62059 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VcanQ62059 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.18□□□□□ -0.14
VcanQ62059 Snora78-201ENSMUST00000158630 128 ntBASIC14.18□□□□□ -0.14
VcanQ62059 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.18□□□□□ -0.14
VcanQ62059 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VcanQ62059 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.18□□□□□ -0.14
VcanQ62059 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.18□□□□□ -0.14
VcanQ62059 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.18□□□□□ -0.14
VcanQ62059 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VcanQ62059 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
VcanQ62059 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.17□□□□□ -0.14
VcanQ62059 Gm27892-201ENSMUST00000185017 106 ntBASIC14.17□□□□□ -0.14
VcanQ62059 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.17□□□□□ -0.14
VcanQ62059 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VcanQ62059 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VcanQ62059 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
VcanQ62059 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VcanQ62059 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VcanQ62059 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.17□□□□□ -0.14
VcanQ62059 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VcanQ62059 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VcanQ62059 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VcanQ62059 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VcanQ62059 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VcanQ62059 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.17□□□□□ -0.14
VcanQ62059 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VcanQ62059 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VcanQ62059 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
VcanQ62059 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
VcanQ62059 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VcanQ62059 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VcanQ62059 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VcanQ62059 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.16□□□□□ -0.14
VcanQ62059 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.16□□□□□ -0.14
VcanQ62059 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.16□□□□□ -0.14
VcanQ62059 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.16□□□□□ -0.14
VcanQ62059 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VcanQ62059 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VcanQ62059 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.16□□□□□ -0.14
VcanQ62059 Gm14660-201ENSMUST00000119809 575 ntBASIC14.16□□□□□ -0.14
VcanQ62059 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.16□□□□□ -0.14
VcanQ62059 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.16□□□□□ -0.14
VcanQ62059 Gm18056-201ENSMUST00000207670 568 ntBASIC14.16□□□□□ -0.14
VcanQ62059 Gm18061-201ENSMUST00000208350 562 ntBASIC14.16□□□□□ -0.14
VcanQ62059 Gm18063-201ENSMUST00000208529 568 ntBASIC14.16□□□□□ -0.14
VcanQ62059 Gm18052-201ENSMUST00000208750 559 ntBASIC14.16□□□□□ -0.14
VcanQ62059 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
VcanQ62059 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VcanQ62059 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
VcanQ62059 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VcanQ62059 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
VcanQ62059 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms