Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli3Q61602 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli3Q61602 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Gli3Q61602 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gli3Q61602 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gli3Q61602 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gli3Q61602 Gm27514-201ENSMUST00000183692 110 ntBASIC20.34■□□□□ 0.85
Gli3Q61602 Gm18934-201ENSMUST00000216671 1044 ntBASIC20.34■□□□□ 0.85
Gli3Q61602 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gli3Q61602 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gli3Q61602 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gli3Q61602 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gli3Q61602 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Gli3Q61602 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gli3Q61602 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gli3Q61602 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gli3Q61602 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Gli3Q61602 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gli3Q61602 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC20.33■□□□□ 0.85
Gli3Q61602 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gli3Q61602 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gli3Q61602 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.33■□□□□ 0.85
Gli3Q61602 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gli3Q61602 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gli3Q61602 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Gli3Q61602 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gli3Q61602 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gli3Q61602 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Gli3Q61602 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.33■□□□□ 0.84
Gli3Q61602 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gli3Q61602 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gli3Q61602 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC20.33■□□□□ 0.84
Gli3Q61602 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Gli3Q61602 Mir125a-201ENSMUST00000083545 68 ntBASIC20.33■□□□□ 0.84
Gli3Q61602 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Gli3Q61602 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gli3Q61602 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Gli3Q61602 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gli3Q61602 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Gli3Q61602 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gli3Q61602 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gli3Q61602 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.32■□□□□ 0.84
Gli3Q61602 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gli3Q61602 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gli3Q61602 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gli3Q61602 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gli3Q61602 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
Gli3Q61602 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gli3Q61602 Gm29127-201ENSMUST00000188304 517 ntBASIC20.32■□□□□ 0.84
Gli3Q61602 Gm4857-201ENSMUST00000192718 785 ntBASIC20.32■□□□□ 0.84
Gli3Q61602 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Gli3Q61602 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gli3Q61602 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Gli3Q61602 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gli3Q61602 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Gli3Q61602 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gli3Q61602 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Gli3Q61602 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gli3Q61602 AC069562.2-201ENSMUST00000224644 2146 ntBASIC20.31■□□□□ 0.84
Gli3Q61602 Gm13350-201ENSMUST00000120519 479 ntBASIC20.31■□□□□ 0.84
Gli3Q61602 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC20.31■□□□□ 0.84
Gli3Q61602 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC20.31■□□□□ 0.84
Gli3Q61602 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC20.31■□□□□ 0.84
Gli3Q61602 AC154846.1-201ENSMUST00000226278 862 ntBASIC20.31■□□□□ 0.84
Gli3Q61602 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gli3Q61602 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gli3Q61602 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gli3Q61602 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gli3Q61602 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gli3Q61602 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gli3Q61602 Gm16570-201ENSMUST00000161951 436 ntBASIC20.3■□□□□ 0.84
Gli3Q61602 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gli3Q61602 Mir7070-201ENSMUST00000183657 86 ntBASIC20.3■□□□□ 0.84
Gli3Q61602 Gm5279-201ENSMUST00000199575 745 ntBASIC20.3■□□□□ 0.84
Gli3Q61602 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gli3Q61602 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gli3Q61602 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gli3Q61602 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gli3Q61602 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gli3Q61602 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gli3Q61602 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gli3Q61602 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gli3Q61602 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gli3Q61602 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gli3Q61602 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.3■□□□□ 0.84
Gli3Q61602 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gli3Q61602 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC20.3■□□□□ 0.84
Gli3Q61602 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Gli3Q61602 Gm7584-201ENSMUST00000175829 940 ntBASIC20.29■□□□□ 0.84
Gli3Q61602 Gm27486-201ENSMUST00000184923 80 ntBASIC20.29■□□□□ 0.84
Gli3Q61602 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gli3Q61602 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gli3Q61602 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Gli3Q61602 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Gli3Q61602 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Gli3Q61602 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gli3Q61602 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gli3Q61602 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gli3Q61602 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC20.29■□□□□ 0.84
Gli3Q61602 Gm29199-201ENSMUST00000187766 775 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms