Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ecm1Q61508 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ecm1Q61508 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ecm1Q61508 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ecm1Q61508 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.84■□□□□ 0.29
Ecm1Q61508 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.84■□□□□ 0.29
Ecm1Q61508 Gm5745-201ENSMUST00000183748 313 ntBASIC16.84■□□□□ 0.29
Ecm1Q61508 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.84■□□□□ 0.29
Ecm1Q61508 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ecm1Q61508 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ecm1Q61508 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.84■□□□□ 0.29
Ecm1Q61508 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ecm1Q61508 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ecm1Q61508 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ecm1Q61508 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ecm1Q61508 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ecm1Q61508 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ecm1Q61508 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ecm1Q61508 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ecm1Q61508 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
Ecm1Q61508 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Ecm1Q61508 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.83■□□□□ 0.28
Ecm1Q61508 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Ecm1Q61508 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ecm1Q61508 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.83■□□□□ 0.28
Ecm1Q61508 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.83■□□□□ 0.28
Ecm1Q61508 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.83■□□□□ 0.28
Ecm1Q61508 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ecm1Q61508 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ecm1Q61508 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ecm1Q61508 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.82■□□□□ 0.28
Ecm1Q61508 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ecm1Q61508 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.82■□□□□ 0.28
Ecm1Q61508 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ecm1Q61508 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.82■□□□□ 0.28
Ecm1Q61508 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.82■□□□□ 0.28
Ecm1Q61508 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ecm1Q61508 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.82■□□□□ 0.28
Ecm1Q61508 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Ecm1Q61508 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Ecm1Q61508 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ecm1Q61508 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ecm1Q61508 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ecm1Q61508 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.81■□□□□ 0.28
Ecm1Q61508 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ecm1Q61508 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.81■□□□□ 0.28
Ecm1Q61508 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.81■□□□□ 0.28
Ecm1Q61508 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ecm1Q61508 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ecm1Q61508 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ecm1Q61508 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ecm1Q61508 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.81■□□□□ 0.28
Ecm1Q61508 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ecm1Q61508 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ecm1Q61508 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ecm1Q61508 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ecm1Q61508 Gm2423-201ENSMUST00000074863 733 ntBASIC16.81■□□□□ 0.28
Ecm1Q61508 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ecm1Q61508 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ecm1Q61508 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.81■□□□□ 0.28
Ecm1Q61508 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ecm1Q61508 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ecm1Q61508 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ecm1Q61508 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ecm1Q61508 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ecm1Q61508 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ecm1Q61508 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ecm1Q61508 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ecm1Q61508 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms