Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mre11Q61216 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Mre11Q61216 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mre11Q61216 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mre11Q61216 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mre11Q61216 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Mre11Q61216 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mre11Q61216 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.33■□□□□ 0.52
Mre11Q61216 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mre11Q61216 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mre11Q61216 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.33■□□□□ 0.52
Mre11Q61216 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.33■□□□□ 0.52
Mre11Q61216 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mre11Q61216 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mre11Q61216 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mre11Q61216 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mre11Q61216 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mre11Q61216 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Mre11Q61216 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Mre11Q61216 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mre11Q61216 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mre11Q61216 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mre11Q61216 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Mre11Q61216 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 CT025610.1-201ENSMUST00000224552 1786 ntBASIC18.32■□□□□ 0.52
Mre11Q61216 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.32■□□□□ 0.52
Mre11Q61216 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.32■□□□□ 0.52
Mre11Q61216 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.32■□□□□ 0.52
Mre11Q61216 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.32■□□□□ 0.52
Mre11Q61216 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Mre11Q61216 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mre11Q61216 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Mre11Q61216 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.32■□□□□ 0.52
Mre11Q61216 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Gm19863-201ENSMUST00000192480 2218 ntBASIC18.31■□□□□ 0.52
Mre11Q61216 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.31■□□□□ 0.52
Mre11Q61216 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.31■□□□□ 0.52
Mre11Q61216 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Mre11Q61216 Carlr-201ENSMUST00000181515 2574 ntBASIC18.31■□□□□ 0.52
Mre11Q61216 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.31■□□□□ 0.52
Mre11Q61216 Gm7370-201ENSMUST00000219471 767 ntBASIC18.31■□□□□ 0.52
Mre11Q61216 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Mre11Q61216 Gm10812-201ENSMUST00000099864 546 ntBASIC18.31■□□□□ 0.52
Mre11Q61216 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Mre11Q61216 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Mre11Q61216 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mre11Q61216 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mre11Q61216 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Mre11Q61216 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mre11Q61216 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Mre11Q61216 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.3■□□□□ 0.52
Mre11Q61216 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mre11Q61216 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mre11Q61216 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mre11Q61216 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mre11Q61216 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Mre11Q61216 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mre11Q61216 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mre11Q61216 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Mre11Q61216 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mre11Q61216 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Mre11Q61216 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC18.3■□□□□ 0.52
Mre11Q61216 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Mre11Q61216 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.3■□□□□ 0.52
Mre11Q61216 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Mre11Q61216 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC18.3■□□□□ 0.52
Mre11Q61216 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mre11Q61216 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms