Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC21.75■■□□□ 1.07
Ptch1Q61115 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptch1Q61115 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptch1Q61115 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptch1Q61115 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptch1Q61115 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptch1Q61115 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC21.75■■□□□ 1.07
Ptch1Q61115 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptch1Q61115 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptch1Q61115 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptch1Q61115 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptch1Q61115 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.75■■□□□ 1.07
Ptch1Q61115 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC21.74■■□□□ 1.07
Ptch1Q61115 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ptch1Q61115 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ptch1Q61115 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptch1Q61115 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptch1Q61115 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptch1Q61115 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC21.74■■□□□ 1.07
Ptch1Q61115 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ptch1Q61115 Tcf21-202ENSMUST00000218002 1788 ntBASIC21.74■■□□□ 1.07
Ptch1Q61115 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptch1Q61115 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptch1Q61115 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptch1Q61115 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptch1Q61115 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptch1Q61115 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC21.73■■□□□ 1.07
Ptch1Q61115 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptch1Q61115 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptch1Q61115 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptch1Q61115 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptch1Q61115 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptch1Q61115 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ptch1Q61115 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch1Q61115 Gm5303-201ENSMUST00000117943 1252 ntBASIC21.72■■□□□ 1.07
Ptch1Q61115 Gm9002-201ENSMUST00000178437 499 ntBASIC21.72■■□□□ 1.07
Ptch1Q61115 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC21.72■■□□□ 1.07
Ptch1Q61115 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch1Q61115 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch1Q61115 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC21.72■■□□□ 1.07
Ptch1Q61115 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch1Q61115 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch1Q61115 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ptch1Q61115 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Ptch1Q61115 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
Ptch1Q61115 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch1Q61115 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch1Q61115 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Ptch1Q61115 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch1Q61115 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch1Q61115 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch1Q61115 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch1Q61115 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Ptch1Q61115 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC21.72■■□□□ 1.07
Ptch1Q61115 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch1Q61115 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptch1Q61115 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC21.71■■□□□ 1.07
Ptch1Q61115 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC21.71■■□□□ 1.07
Ptch1Q61115 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch1Q61115 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch1Q61115 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch1Q61115 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch1Q61115 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC21.71■■□□□ 1.07
Ptch1Q61115 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ptch1Q61115 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ptch1Q61115 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch1Q61115 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch1Q61115 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch1Q61115 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch1Q61115 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC21.71■■□□□ 1.07
Ptch1Q61115 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Ptch1Q61115 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC21.71■■□□□ 1.07
Ptch1Q61115 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ptch1Q61115 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC21.71■■□□□ 1.07
Ptch1Q61115 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Ptch1Q61115 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC21.71■■□□□ 1.07
Ptch1Q61115 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptch1Q61115 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptch1Q61115 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptch1Q61115 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC21.7■■□□□ 1.06
Ptch1Q61115 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC21.7■■□□□ 1.06
Ptch1Q61115 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC21.7■■□□□ 1.06
Ptch1Q61115 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ptch1Q61115 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC21.7■■□□□ 1.06
Ptch1Q61115 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC21.7■■□□□ 1.06
Ptch1Q61115 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptch1Q61115 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptch1Q61115 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ptch1Q61115 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ptch1Q61115 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptch1Q61115 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptch1Q61115 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptch1Q61115 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptch1Q61115 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptch1Q61115 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptch1Q61115 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ptch1Q61115 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptch1Q61115 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptch1Q61115 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptch1Q61115 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms