Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Foxd3Q61060 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Foxd3Q61060 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Foxd3Q61060 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.04□□□□□ -0.16
Foxd3Q61060 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxd3Q61060 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Foxd3Q61060 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.03□□□□□ -0.16
Foxd3Q61060 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Foxd3Q61060 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.03□□□□□ -0.16
Foxd3Q61060 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.03□□□□□ -0.16
Foxd3Q61060 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.03□□□□□ -0.16
Foxd3Q61060 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.03□□□□□ -0.16
Foxd3Q61060 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Foxd3Q61060 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.03□□□□□ -0.16
Foxd3Q61060 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.03□□□□□ -0.16
Foxd3Q61060 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxd3Q61060 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.03□□□□□ -0.16
Foxd3Q61060 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxd3Q61060 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxd3Q61060 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxd3Q61060 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxd3Q61060 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxd3Q61060 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Foxd3Q61060 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxd3Q61060 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.02□□□□□ -0.16
Foxd3Q61060 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Foxd3Q61060 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Foxd3Q61060 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Foxd3Q61060 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.02□□□□□ -0.17
Foxd3Q61060 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.02□□□□□ -0.17
Foxd3Q61060 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.02□□□□□ -0.17
Foxd3Q61060 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.02□□□□□ -0.17
Foxd3Q61060 Gm18206-201ENSMUST00000207027 926 ntBASIC14.02□□□□□ -0.17
Foxd3Q61060 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.02□□□□□ -0.17
Foxd3Q61060 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.02□□□□□ -0.17
Foxd3Q61060 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Foxd3Q61060 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Foxd3Q61060 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Foxd3Q61060 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxd3Q61060 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxd3Q61060 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxd3Q61060 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxd3Q61060 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxd3Q61060 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxd3Q61060 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxd3Q61060 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxd3Q61060 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxd3Q61060 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxd3Q61060 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxd3Q61060 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxd3Q61060 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Foxd3Q61060 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.01□□□□□ -0.17
Foxd3Q61060 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Foxd3Q61060 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.01□□□□□ -0.17
Foxd3Q61060 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.01□□□□□ -0.17
Foxd3Q61060 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms