Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1h4Q60641 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Nr1h4Q60641 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1h4Q60641 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Nr1h4Q60641 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1h4Q60641 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1h4Q60641 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Nr1h4Q60641 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1h4Q60641 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1h4Q60641 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1h4Q60641 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1h4Q60641 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nr1h4Q60641 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm8825-201ENSMUST00000182565 998 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm4518-201ENSMUST00000182638 718 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.55□□□□□ -0.08
Nr1h4Q60641 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.55□□□□□ -0.08
Nr1h4Q60641 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nr1h4Q60641 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Gm11950-201ENSMUST00000121615 838 ntBASIC14.54□□□□□ -0.08
Nr1h4Q60641 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Gm9172-201ENSMUST00000212092 954 ntBASIC14.54□□□□□ -0.08
Nr1h4Q60641 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nr1h4Q60641 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.54□□□□□ -0.08
Nr1h4Q60641 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nr1h4Q60641 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms