Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav5d-4Q5R1F6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Gm14722-201ENSMUST00000118943 689 ntBASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Gm9103-201ENSMUST00000119371 405 ntBASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav5d-4Q5R1F6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav5d-4Q5R1F6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.31
Trav5d-4Q5R1F6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav5d-4Q5R1F6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms