Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav3-3Q5R1C3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav3-3Q5R1C3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Gm5643-201ENSMUST00000117081 966 ntBASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav3-3Q5R1C3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Gm15039-201ENSMUST00000118914 875 ntBASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Gm37856-201ENSMUST00000191634 999 ntBASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms