Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-2Q5R1B6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav8d-2Q5R1B6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Gm24694-201ENSMUST00000180054 110 ntBASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Gm27663-201ENSMUST00000184839 110 ntBASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-2Q5R1B6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Gm12859-201ENSMUST00000117834 427 ntBASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav8d-2Q5R1B6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms