Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf20Q5DTM8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.21■□□□□ 0.5
Rnf20Q5DTM8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Rnf20Q5DTM8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rnf20Q5DTM8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf20Q5DTM8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rnf20Q5DTM8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf20Q5DTM8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Gm7222-201ENSMUST00000117512 906 ntBASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.17■□□□□ 0.5
Rnf20Q5DTM8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf20Q5DTM8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms