Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Mir1895-201ENSMUST00000122615 79 ntBASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Gm10154-201ENSMUST00000084445 354 ntBASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rc3h1Q4VGL6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rc3h1Q4VGL6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Rc3h1Q4VGL6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rc3h1Q4VGL6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rc3h1Q4VGL6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rc3h1Q4VGL6 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Rc3h1Q4VGL6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Rc3h1Q4VGL6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rc3h1Q4VGL6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rc3h1Q4VGL6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Rc3h1Q4VGL6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rc3h1Q4VGL6 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.58■□□□□ 0.41
Rc3h1Q4VGL6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Gm44335-201ENSMUST00000196879 141 ntBASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Gm44297-201ENSMUST00000198304 141 ntBASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Gm44346-201ENSMUST00000198851 141 ntBASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rc3h1Q4VGL6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Gm14701-201ENSMUST00000117156 348 ntBASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rc3h1Q4VGL6 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms