Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tmem40Q4FJU9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tmem40Q4FJU9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Tmem40Q4FJU9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Gm11185-201ENSMUST00000117732 1007 ntBASIC13□□□□□ -0.33
Tmem40Q4FJU9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Gm44492-201ENSMUST00000197012 141 ntBASIC13□□□□□ -0.33
Tmem40Q4FJU9 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 AC159295.1-201ENSMUST00000225326 940 ntBASIC13□□□□□ -0.33
Tmem40Q4FJU9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Gm8396-201ENSMUST00000057361 823 ntBASIC13□□□□□ -0.33
Tmem40Q4FJU9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tmem40Q4FJU9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Mir6956-201ENSMUST00000183598 62 ntBASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tmem40Q4FJU9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 AC125117.2-201ENSMUST00000228344 1140 ntBASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tmem40Q4FJU9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms