Protein–RNA interactions for Protein: Q3V3V9

Carmil2, Capping protein, Arp2/3 and myosin-I linker protein 2, mousemouse

Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil2Q3V3V9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Carmil2Q3V3V9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Carmil2Q3V3V9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Carmil2Q3V3V9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Carmil2Q3V3V9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Carmil2Q3V3V9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Carmil2Q3V3V9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Carmil2Q3V3V9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Carmil2Q3V3V9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Carmil2Q3V3V9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Carmil2Q3V3V9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Carmil2Q3V3V9 Asic1-205ENSMUST00000228185 1818 ntBASIC17.1■□□□□ 0.33
Carmil2Q3V3V9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Carmil2Q3V3V9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Gm11780-201ENSMUST00000136880 516 ntBASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Carmil2Q3V3V9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Carmil2Q3V3V9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Carmil2Q3V3V9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Carmil2Q3V3V9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Carmil2Q3V3V9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Sybu-209ENSMUST00000228639 4113 ntBASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Carmil2Q3V3V9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Gm18622-201ENSMUST00000219361 595 ntBASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Carmil2Q3V3V9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms