Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Gm2272-201ENSMUST00000194903 582 ntBASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Gm45612-201ENSMUST00000211320 160 ntBASIC14.79□□□□□ -0.04
Rnf223Q3UV31 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf223Q3UV31 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Rpph1-201ENSMUST00000175096 319 ntBASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf223Q3UV31 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf223Q3UV31 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Gm11025-201ENSMUST00000140773 466 ntBASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Gm27494-201ENSMUST00000184735 189 ntBASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Gm19087-201ENSMUST00000191430 946 ntBASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Gm10154-201ENSMUST00000084445 354 ntBASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf223Q3UV31 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rnf223Q3UV31 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf223Q3UV31 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf223Q3UV31 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf223Q3UV31 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf223Q3UV31 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf223Q3UV31 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf223Q3UV31 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rnf223Q3UV31 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms