Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Gm14042-201ENSMUST00000120139 833 ntBASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Fam196aQ3USH1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam196aQ3USH1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Fam196aQ3USH1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam196aQ3USH1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Fam196aQ3USH1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam196aQ3USH1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam196aQ3USH1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam196aQ3USH1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Fam196aQ3USH1 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam196aQ3USH1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
Fam196aQ3USH1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Fam196aQ3USH1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fam196aQ3USH1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Fam196aQ3USH1 Gm15823-201ENSMUST00000064305 670 ntBASIC15.27■□□□□ 0.04
Fam196aQ3USH1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fam196aQ3USH1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Fam196aQ3USH1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Fam196aQ3USH1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fam196aQ3USH1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fam196aQ3USH1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fam196aQ3USH1 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.27■□□□□ 0.03
Fam196aQ3USH1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Fam196aQ3USH1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Fam196aQ3USH1 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Gm24543-201ENSMUST00000103867 82 ntBASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Gm45668-201ENSMUST00000211271 493 ntBASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Gm20445-201ENSMUST00000061905 565 ntBASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fam196aQ3USH1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 AY702102-202ENSMUST00000194651 1173 ntBASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fam196aQ3USH1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms