Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cks1brtQ3UNC9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Gm12382-201ENSMUST00000122005 922 ntBASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cks1brtQ3UNC9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1brtQ3UNC9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1brtQ3UNC9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1brtQ3UNC9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Cks1brtQ3UNC9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1brtQ3UNC9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1brtQ3UNC9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cks1brtQ3UNC9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Gm21168-201ENSMUST00000199646 1096 ntBASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cks1brtQ3UNC9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms