Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Naf1Q3UMQ8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Naf1Q3UMQ8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Naf1Q3UMQ8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Naf1Q3UMQ8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.52■□□□□ 0.07
Naf1Q3UMQ8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Naf1Q3UMQ8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Naf1Q3UMQ8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Naf1Q3UMQ8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Naf1Q3UMQ8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Gm17271-201ENSMUST00000165535 355 ntBASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Chchd1-203ENSMUST00000224633 557 ntBASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Naf1Q3UMQ8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Gm25925-201ENSMUST00000158314 306 ntBASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Naf1Q3UMQ8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Naf1Q3UMQ8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Naf1Q3UMQ8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Naf1Q3UMQ8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Naf1Q3UMQ8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Naf1Q3UMQ8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Naf1Q3UMQ8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Naf1Q3UMQ8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Naf1Q3UMQ8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms