Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim43aQ3TL54 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.22■□□□□ 0.19
Trim43aQ3TL54 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim43aQ3TL54 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trim43aQ3TL54 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.21■□□□□ 0.18
Trim43aQ3TL54 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim43aQ3TL54 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim43aQ3TL54 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.19■□□□□ 0.18
Trim43aQ3TL54 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms