Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Khdc4Q3TCX3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Khdc4Q3TCX3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.56□□□□□ -0.08
Khdc4Q3TCX3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Khdc4Q3TCX3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Khdc4Q3TCX3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Khdc4Q3TCX3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Gm5682-201ENSMUST00000173402 505 ntBASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Khdc4Q3TCX3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Mir3113-201ENSMUST00000175478 76 ntBASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.53□□□□□ -0.08
Khdc4Q3TCX3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Khdc4Q3TCX3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Khdc4Q3TCX3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Khdc4Q3TCX3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Khdc4Q3TCX3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Khdc4Q3TCX3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Khdc4Q3TCX3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms