Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm4607-201ENSMUST00000206649 577 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC8□□□□□ -1.13
Ush2AQ2QI47 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Gm6203-201ENSMUST00000209575 1342 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 Gm8318-201ENSMUST00000182954 872 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 Gm5850-201ENSMUST00000192923 1206 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 Gm43818-201ENSMUST00000200605 466 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC8□□□□□ -1.13
Ush2AQ2QI47 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC8□□□□□ -1.13
Ush2AQ2QI47 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC8□□□□□ -1.13
Ush2AQ2QI47 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC8□□□□□ -1.13
Ush2AQ2QI47 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC8□□□□□ -1.13
Ush2AQ2QI47 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Ush2AQ2QI47 Gm14130-201ENSMUST00000118417 987 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 Gm13297-201ENSMUST00000120205 934 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Gm43133-201ENSMUST00000197472 463 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 Gm14267-206ENSMUST00000226870 1209 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Gm7467-201ENSMUST00000185173 652 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 AC140406.1-201ENSMUST00000226481 465 ntBASIC8□□□□□ -1.13
Ush2AQ2QI47 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Ush2AQ2QI47 Gm24255-201ENSMUST00000104481 128 ntBASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Gm4909-201ENSMUST00000118749 794 ntBASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Mir1943-201ENSMUST00000158276 73 ntBASIC7.99□□□□□ -1.13
Ush2AQ2QI47 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Gm34767-201ENSMUST00000191813 1062 ntBASIC7.99□□□□□ -1.13
Ush2AQ2QI47 AC102291.3-201ENSMUST00000226566 405 ntBASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Gm27438-201ENSMUST00000183480 110 ntBASIC7.99□□□□□ -1.13
Ush2AQ2QI47 AC124457.1-201ENSMUST00000198845 120 ntBASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 AC123834.2-201ENSMUST00000224038 2340 ntBASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Gm44364-201ENSMUST00000198368 141 ntBASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Gm43378-201ENSMUST00000199336 582 ntBASIC7.99□□□□□ -1.13
Ush2AQ2QI47 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
Ush2AQ2QI47 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms