Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Col19a1Q0VF58 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col19a1Q0VF58 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col19a1Q0VF58 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.18■□□□□ 0.18
Col19a1Q0VF58 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col19a1Q0VF58 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.18■□□□□ 0.18
Col19a1Q0VF58 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Gm12742-201ENSMUST00000117326 410 ntBASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Gm12957-201ENSMUST00000117835 377 ntBASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Mir6392-201ENSMUST00000184924 108 ntBASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col19a1Q0VF58 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Mir1982-201ENSMUST00000157368 74 ntBASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Gm28760-201ENSMUST00000185995 736 ntBASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.16■□□□□ 0.18
Col19a1Q0VF58 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Gm9797-201ENSMUST00000052902 613 ntBASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col19a1Q0VF58 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Gm4984-201ENSMUST00000115987 360 ntBASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 CT030657.3-201ENSMUST00000222707 1200 ntBASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col19a1Q0VF58 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Col19a1Q0VF58 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Gm3436-201ENSMUST00000179930 840 ntBASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Dupd1-202ENSMUST00000224735 548 ntBASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col19a1Q0VF58 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col19a1Q0VF58 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col19a1Q0VF58 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms