Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Cacna1aP97445 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Gm14719-201ENSMUST00000121891 340 ntBASIC14.09□□□□□ -0.15
Cacna1aP97445 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.09□□□□□ -0.15
Cacna1aP97445 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Cacna1aP97445 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cacna1aP97445 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cacna1aP97445 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.08□□□□□ -0.16
Cacna1aP97445 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.08□□□□□ -0.16
Cacna1aP97445 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.08□□□□□ -0.16
Cacna1aP97445 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.08□□□□□ -0.16
Cacna1aP97445 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.08□□□□□ -0.16
Cacna1aP97445 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.08□□□□□ -0.16
Cacna1aP97445 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cacna1aP97445 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cacna1aP97445 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.08□□□□□ -0.16
Cacna1aP97445 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.08□□□□□ -0.16
Cacna1aP97445 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.08□□□□□ -0.16
Cacna1aP97445 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.08□□□□□ -0.16
Cacna1aP97445 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cacna1aP97445 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.07□□□□□ -0.16
Cacna1aP97445 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Cacna1aP97445 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cacna1aP97445 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.07□□□□□ -0.16
Cacna1aP97445 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.07□□□□□ -0.16
Cacna1aP97445 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.07□□□□□ -0.16
Cacna1aP97445 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.07□□□□□ -0.16
Cacna1aP97445 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.07□□□□□ -0.16
Cacna1aP97445 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Cacna1aP97445 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.07□□□□□ -0.16
Cacna1aP97445 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.07□□□□□ -0.16
Cacna1aP97445 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.07□□□□□ -0.16
Cacna1aP97445 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cacna1aP97445 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.07□□□□□ -0.16
Cacna1aP97445 Gm13015-201ENSMUST00000118674 204 ntBASIC14.07□□□□□ -0.16
Cacna1aP97445 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Gm44855-201ENSMUST00000205725 362 ntBASIC14.07□□□□□ -0.16
Cacna1aP97445 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cacna1aP97445 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1aP97445 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.06□□□□□ -0.16
Cacna1aP97445 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1aP97445 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1aP97445 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1aP97445 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1aP97445 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cacna1aP97445 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1aP97445 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1aP97445 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.06□□□□□ -0.16
Cacna1aP97445 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Cacna1aP97445 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cacna1aP97445 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.06□□□□□ -0.16
Cacna1aP97445 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.06□□□□□ -0.16
Cacna1aP97445 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1aP97445 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cacna1aP97445 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms