Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pdlim4P70271 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.73□□□□□ -0.37
Pdlim4P70271 Gm15173-201ENSMUST00000122049 433 ntBASIC12.73□□□□□ -0.37
Pdlim4P70271 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim4P70271 Gm6089-201ENSMUST00000197666 938 ntBASIC12.73□□□□□ -0.37
Pdlim4P70271 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.73□□□□□ -0.37
Pdlim4P70271 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.73□□□□□ -0.37
Pdlim4P70271 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim4P70271 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim4P70271 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Pdlim4P70271 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.73□□□□□ -0.37
Pdlim4P70271 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pdlim4P70271 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pdlim4P70271 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Asic1-205ENSMUST00000228185 1818 ntBASIC12.72□□□□□ -0.37
Pdlim4P70271 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pdlim4P70271 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.72□□□□□ -0.37
Pdlim4P70271 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.72□□□□□ -0.37
Pdlim4P70271 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pdlim4P70271 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pdlim4P70271 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pdlim4P70271 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pdlim4P70271 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pdlim4P70271 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pdlim4P70271 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pdlim4P70271 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Pdlim4P70271 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pdlim4P70271 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pdlim4P70271 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
Pdlim4P70271 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.71□□□□□ -0.37
Pdlim4P70271 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.71□□□□□ -0.37
Pdlim4P70271 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pdlim4P70271 Gm7230-201ENSMUST00000173026 815 ntBASIC12.71□□□□□ -0.37
Pdlim4P70271 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pdlim4P70271 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
Pdlim4P70271 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.71□□□□□ -0.37
Pdlim4P70271 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
Pdlim4P70271 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Gm10060-201ENSMUST00000212002 111 ntBASIC12.71□□□□□ -0.37
Pdlim4P70271 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.71□□□□□ -0.37
Pdlim4P70271 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pdlim4P70271 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdlim4P70271 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pdlim4P70271 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdlim4P70271 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.71□□□□□ -0.38
Pdlim4P70271 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pdlim4P70271 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms