Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Hmgb1P63158 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hmgb1P63158 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb1P63158 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Hmgb1P63158 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb1P63158 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb1P63158 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb1P63158 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb1P63158 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmgb1P63158 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.82■□□□□ 0.28
Hmgb1P63158 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Hmgb1P63158 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.82■□□□□ 0.28
Hmgb1P63158 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hmgb1P63158 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hmgb1P63158 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Hmgb1P63158 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmgb1P63158 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.81■□□□□ 0.28
Hmgb1P63158 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.81■□□□□ 0.28
Hmgb1P63158 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.81■□□□□ 0.28
Hmgb1P63158 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hmgb1P63158 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.81■□□□□ 0.28
Hmgb1P63158 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmgb1P63158 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Hmgb1P63158 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.8■□□□□ 0.28
Hmgb1P63158 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.8■□□□□ 0.28
Hmgb1P63158 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.8■□□□□ 0.28
Hmgb1P63158 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Hmgb1P63158 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.8■□□□□ 0.28
Hmgb1P63158 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hmgb1P63158 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.8■□□□□ 0.28
Hmgb1P63158 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb1P63158 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb1P63158 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb1P63158 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb1P63158 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.79■□□□□ 0.28
Hmgb1P63158 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb1P63158 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb1P63158 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Hmgb1P63158 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb1P63158 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb1P63158 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Hmgb1P63158 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Hmgb1P63158 Gm8097-201ENSMUST00000117903 829 ntBASIC16.79■□□□□ 0.28
Hmgb1P63158 Gm12644-201ENSMUST00000119935 606 ntBASIC16.79■□□□□ 0.28
Hmgb1P63158 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Hmgb1P63158 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Hmgb1P63158 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms