Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Lsm3P62311 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.99□□□□□ -0.17
Lsm3P62311 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Lsm3P62311 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.98□□□□□ -0.17
Lsm3P62311 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.98□□□□□ -0.17
Lsm3P62311 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
Lsm3P62311 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.98□□□□□ -0.17
Lsm3P62311 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Lsm3P62311 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.98□□□□□ -0.17
Lsm3P62311 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Lsm3P62311 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.98□□□□□ -0.17
Lsm3P62311 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Lsm3P62311 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.98□□□□□ -0.17
Lsm3P62311 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm3P62311 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lsm3P62311 Acot6-202ENSMUST00000222921 3622 ntBASIC13.97□□□□□ -0.17
Lsm3P62311 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Lsm3P62311 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lsm3P62311 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.97□□□□□ -0.17
Lsm3P62311 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.97□□□□□ -0.17
Lsm3P62311 Gm18666-201ENSMUST00000190039 958 ntBASIC13.97□□□□□ -0.17
Lsm3P62311 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.97□□□□□ -0.17
Lsm3P62311 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.97□□□□□ -0.17
Lsm3P62311 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Lsm3P62311 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Lsm3P62311 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lsm3P62311 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lsm3P62311 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm3P62311 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Lsm3P62311 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.96□□□□□ -0.17
Lsm3P62311 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.96□□□□□ -0.17
Lsm3P62311 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.96□□□□□ -0.17
Lsm3P62311 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Lsm3P62311 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Lsm3P62311 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm3P62311 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Lsm3P62311 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms