Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Lmo4P61969 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Lmo4P61969 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 App-207ENSMUST00000227737 2827 ntBASIC12.32□□□□□ -0.44
Lmo4P61969 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lmo4P61969 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
Lmo4P61969 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Lmo4P61969 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.31□□□□□ -0.44
Lmo4P61969 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Lmo4P61969 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.31□□□□□ -0.44
Lmo4P61969 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Lmo4P61969 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Lmo4P61969 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.31□□□□□ -0.44
Lmo4P61969 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.31□□□□□ -0.44
Lmo4P61969 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lmo4P61969 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lmo4P61969 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lmo4P61969 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lmo4P61969 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lmo4P61969 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.3□□□□□ -0.44
Lmo4P61969 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lmo4P61969 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lmo4P61969 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lmo4P61969 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.3□□□□□ -0.44
Lmo4P61969 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lmo4P61969 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lmo4P61969 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.3□□□□□ -0.44
Lmo4P61969 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lmo4P61969 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lmo4P61969 Gm11543-201ENSMUST00000120758 370 ntBASIC12.3□□□□□ -0.44
Lmo4P61969 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.3□□□□□ -0.44
Lmo4P61969 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.3□□□□□ -0.44
Lmo4P61969 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.3□□□□□ -0.44
Lmo4P61969 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lmo4P61969 Gm24158-201ENSMUST00000175263 71 ntBASIC12.3□□□□□ -0.44
Lmo4P61969 Gm10253-201ENSMUST00000194270 940 ntBASIC12.3□□□□□ -0.44
Lmo4P61969 Gm7774-201ENSMUST00000200064 533 ntBASIC12.3□□□□□ -0.44
Lmo4P61969 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lmo4P61969 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.3□□□□□ -0.44
Lmo4P61969 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lmo4P61969 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lmo4P61969 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Lmo4P61969 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lmo4P61969 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lmo4P61969 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Lmo4P61969 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lmo4P61969 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lmo4P61969 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lmo4P61969 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lmo4P61969 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lmo4P61969 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lmo4P61969 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Lmo4P61969 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lmo4P61969 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lmo4P61969 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.29□□□□□ -0.44
Lmo4P61969 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.29□□□□□ -0.44
Lmo4P61969 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.29□□□□□ -0.44
Lmo4P61969 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.29□□□□□ -0.44
Lmo4P61969 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Lmo4P61969 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.29□□□□□ -0.44
Lmo4P61969 Gm18737-201ENSMUST00000173594 937 ntBASIC12.29□□□□□ -0.44
Lmo4P61969 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms