Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.49□□□□□ -0.25
Sec61a1P61620 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.49□□□□□ -0.25
Sec61a1P61620 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.49□□□□□ -0.25
Sec61a1P61620 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
Sec61a1P61620 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.48□□□□□ -0.25
Sec61a1P61620 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Sec61a1P61620 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sec61a1P61620 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.48□□□□□ -0.25
Sec61a1P61620 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Gm7153-201ENSMUST00000117092 455 ntBASIC13.48□□□□□ -0.25
Sec61a1P61620 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.48□□□□□ -0.25
Sec61a1P61620 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Sec61a1P61620 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.48□□□□□ -0.25
Sec61a1P61620 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sec61a1P61620 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Sec61a1P61620 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Sec61a1P61620 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Sec61a1P61620 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Sec61a1P61620 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.47□□□□□ -0.25
Sec61a1P61620 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
Sec61a1P61620 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Sec61a1P61620 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Gm12895-201ENSMUST00000122214 226 ntBASIC13.47□□□□□ -0.25
Sec61a1P61620 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Sec61a1P61620 Gm34391-201ENSMUST00000203706 907 ntBASIC13.47□□□□□ -0.25
Sec61a1P61620 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Sec61a1P61620 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.47□□□□□ -0.25
Sec61a1P61620 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.47□□□□□ -0.25
Sec61a1P61620 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Sec61a1P61620 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.46□□□□□ -0.25
Sec61a1P61620 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Sec61a1P61620 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Sec61a1P61620 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.46□□□□□ -0.25
Sec61a1P61620 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.46□□□□□ -0.25
Sec61a1P61620 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Sec61a1P61620 Gm44430-201ENSMUST00000203376 995 ntBASIC13.46□□□□□ -0.25
Sec61a1P61620 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.46□□□□□ -0.25
Sec61a1P61620 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sec61a1P61620 Gm7461-201ENSMUST00000058918 827 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms