Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.36□□□□□ -0.43
Sssca1P56873 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.36□□□□□ -0.43
Sssca1P56873 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sssca1P56873 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sssca1P56873 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sssca1P56873 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Gm15565-201ENSMUST00000118890 427 ntBASIC12.36□□□□□ -0.43
Sssca1P56873 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.36□□□□□ -0.43
Sssca1P56873 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.36□□□□□ -0.43
Sssca1P56873 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Sssca1P56873 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sssca1P56873 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.36□□□□□ -0.43
Sssca1P56873 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sssca1P56873 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sssca1P56873 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sssca1P56873 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sssca1P56873 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sssca1P56873 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.35□□□□□ -0.43
Sssca1P56873 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sssca1P56873 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.35□□□□□ -0.43
Sssca1P56873 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Sssca1P56873 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Sssca1P56873 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Gm10013-201ENSMUST00000106074 672 ntBASIC12.35□□□□□ -0.43
Sssca1P56873 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Gm25406-201ENSMUST00000157599 105 ntBASIC12.35□□□□□ -0.43
Sssca1P56873 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.35□□□□□ -0.43
Sssca1P56873 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.35□□□□□ -0.43
Sssca1P56873 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sssca1P56873 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sssca1P56873 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.35□□□□□ -0.43
Sssca1P56873 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sssca1P56873 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sssca1P56873 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Sssca1P56873 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.34□□□□□ -0.43
Sssca1P56873 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sssca1P56873 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms