Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.28■□□□□ 0.04
Lim2P56563 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.28■□□□□ 0.04
Lim2P56563 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Lim2P56563 Gm18489-201ENSMUST00000172565 551 ntBASIC15.28■□□□□ 0.04
Lim2P56563 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.28■□□□□ 0.04
Lim2P56563 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.28■□□□□ 0.04
Lim2P56563 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.28■□□□□ 0.04
Lim2P56563 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.28■□□□□ 0.04
Lim2P56563 Gm45167-201ENSMUST00000208007 322 ntBASIC15.28■□□□□ 0.04
Lim2P56563 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.28■□□□□ 0.04
Lim2P56563 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Lim2P56563 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Lim2P56563 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lim2P56563 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lim2P56563 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lim2P56563 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.27■□□□□ 0.04
Lim2P56563 Gm9682-201ENSMUST00000197505 556 ntBASIC15.27■□□□□ 0.04
Lim2P56563 Gm43514-201ENSMUST00000198852 424 ntBASIC15.27■□□□□ 0.04
Lim2P56563 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.27■□□□□ 0.04
Lim2P56563 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.27■□□□□ 0.04
Lim2P56563 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.27■□□□□ 0.04
Lim2P56563 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lim2P56563 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lim2P56563 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lim2P56563 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lim2P56563 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lim2P56563 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lim2P56563 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lim2P56563 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lim2P56563 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lim2P56563 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lim2P56563 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Lim2P56563 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lim2P56563 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lim2P56563 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.26■□□□□ 0.03
Lim2P56563 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lim2P56563 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.26■□□□□ 0.03
Lim2P56563 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lim2P56563 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lim2P56563 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lim2P56563 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lim2P56563 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lim2P56563 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lim2P56563 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lim2P56563 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.26■□□□□ 0.03
Lim2P56563 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Lim2P56563 Gm5364-201ENSMUST00000216789 889 ntBASIC15.26■□□□□ 0.03
Lim2P56563 Psmb5-202ENSMUST00000227257 622 ntBASIC15.26■□□□□ 0.03
Lim2P56563 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.26■□□□□ 0.03
Lim2P56563 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Lim2P56563 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lim2P56563 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lim2P56563 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lim2P56563 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.26■□□□□ 0.03
Lim2P56563 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lim2P56563 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Lim2P56563 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lim2P56563 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lim2P56563 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lim2P56563 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Lim2P56563 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.25■□□□□ 0.03
Lim2P56563 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Lim2P56563 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.25■□□□□ 0.03
Lim2P56563 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lim2P56563 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.25■□□□□ 0.03
Lim2P56563 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lim2P56563 Gm7787-201ENSMUST00000216858 688 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms