Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Sox3P53784 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.64□□□□□ -0.07
Sox3P53784 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Sox3P53784 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.64□□□□□ -0.07
Sox3P53784 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Sox3P53784 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.64□□□□□ -0.07
Sox3P53784 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.64□□□□□ -0.07
Sox3P53784 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.64□□□□□ -0.07
Sox3P53784 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Sox3P53784 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox3P53784 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Sox3P53784 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox3P53784 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Sox3P53784 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sox3P53784 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Sox3P53784 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Sox3P53784 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.63□□□□□ -0.07
Sox3P53784 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.63□□□□□ -0.07
Sox3P53784 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Sox3P53784 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Sox3P53784 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sox3P53784 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox3P53784 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox3P53784 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox3P53784 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sox3P53784 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.62□□□□□ -0.07
Sox3P53784 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sox3P53784 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.62□□□□□ -0.07
Sox3P53784 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Gm11764-201ENSMUST00000120221 623 ntBASIC14.62□□□□□ -0.07
Sox3P53784 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.62□□□□□ -0.07
Sox3P53784 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.62□□□□□ -0.07
Sox3P53784 Gm17271-201ENSMUST00000165535 355 ntBASIC14.62□□□□□ -0.07
Sox3P53784 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.62□□□□□ -0.07
Sox3P53784 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.62□□□□□ -0.07
Sox3P53784 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.62□□□□□ -0.07
Sox3P53784 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Sybu-209ENSMUST00000228639 4113 ntBASIC14.62□□□□□ -0.07
Sox3P53784 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sox3P53784 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sox3P53784 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.61□□□□□ -0.07
Sox3P53784 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox3P53784 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox3P53784 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox3P53784 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sox3P53784 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sox3P53784 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Sox3P53784 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.61□□□□□ -0.07
Sox3P53784 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms